Data Processing Workshop (Mar. 2020)

Data Processing (Mar. 2020)

         3 days
📅        March 9-11th
💰        At no cost
🏨       Room and Board provided
👥       10 Trainees
🎟
       For PNCC Compute Account (Cascade) Holders ONLY


Pacific Northwest Center for CryoEM (PNCC) would like to offer a three-day hands-on training workshop for 10 trainees on introduction to Relion, cryoSPARC, and cisTEM held at PNCC between March 9-11th 2020. Students will gain experience processing test dataset or their own PNCC datasets using this state-of-the-art software. Students do not require any pre-existing knowledge of cryo-EM 3D reconstruction, but familiarity of terminal sessions and unix command lines is required.

Location: RLSB, 2730 S.W. Moody Ave, Portland, OR 97201

 

Accepting applications until February 10th, 2020 at 5pm (PST).

(All General Access Proposals have a limit of 1 PNCC Compute user account. If you want a PNCC Compute account and are affiliated with an approved PNCC General Access Proposal, contact Lauren.HalesBeck@pnnl.gov.)

 

Hands-On Session:

             3 days

             AM Intros and Tutorials

             PM Hands-on

            

             Day 1

08-09: Onsite Badging and Introductions

09-13: Relion Intro

11-13: Relion Tutorial Workflow

13-14: Lunch Break

14-18: User Dataset Processing/Advanced Methods

 

             Day 2

09-13: CryoSPARC Intro

11-13: CryoSPARC Tutorial Workflow

13-14: Lunch Break

14-18: User Dataset Processing/Advanced Methods

 

             Day 3

09-11: cisTEM Intro

11-13: cisTEM Tutorial Workflow

13-14: Lunch Break

14-18: User Dataset Processing/Advanced Methods